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1

The manipulation of images to handle indeterminacy in spatial reasoning

Thomas R. Ioerger

Journal:

Cognitive Science (Elsevier Science)

Year:

1994

Language:

english

File:

PDF, 3.10 MB

english, 1994

2

Structural genomics approach to drug discovery for Mycobacterium tuberculosis

Thomas R Ioerger, James C Sacchettini

Journal:

Current Opinion in Microbiology

Year:

2009

Language:

english

File:

PDF, 1.94 MB

english, 2009

3

Searching for representations to improve protein sequence fold-class prediction

Ioerger, Thomas R., Rendell, Larry A., Subramaniam, Shankar

Journal:

Machine Learning

Year:

1995

Language:

english

File:

PDF, 1.54 MB

english, 1995

4

Searching for Representations to Improve Protein Sequence Fold-Class Prediction

Ioerger, Thomas R., Rendell, Larry A., Subramaniam, Shankar

Journal:

Machine Learning

Year:

1995

Language:

english

File:

PDF, 1.79 MB

english, 1995

5

Tryptophan Biosynthesis Protects Mycobacteria from CD4 T-Cell-Mediated Killing

Zhang, Yanjia J., Reddy, Manchi C., Ioerger, Thomas R., Rothchild, Alissa C., Dartois, Veronique, Schuster, Brian M., Trauner, Andrej, Wallis, Deeann, Galaviz, Stacy, Huttenhower, Curtis, Sacchettini,

Journal:

Year:

2013

Language:

english

File:

PDF, 2.76 MB

english, 2013

6

A Multifaceted Secondary Structure Mimic Based On Piperidine-piperidinones

Xin, Dongyue, Perez, Lisa M., Ioerger, Thomas R., Burgess, Kevin

Journal:

Angewandte Chemie International Edition

Year:

2014

Language:

english

File:

PDF, 922 KB

english, 2014

7

Chlorflavonin targets acetohydroxyacid synthase catalytic subunit IlvB1 for synergistic killing of Mycobacterium tuberculosis

Rehberg, Nidja, Akone, Herve Sergi, Ioerger, Thomas R, Erlenkamp, German, Daletos, Georgios, Gohlke, Holger, Proksch, Peter, Kalscheuer, Rainer

Journal:

ACS Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 2.72 MB

english, 2017

8

The 7-phenyl benzoxaborole series is active against Mycobacterium tuberculosis

Korkegian, Aaron, O'Malley, Theresa, Xia, Yi, Zhou, Yasheen, Carter, David S., Sunde, Bjorn, Flint, Lindsay, Thompson, Dean, Ioerger, Thomas R., Sacchettini, Jim, Alley, M.R.K., Parish, Tanya

Journal:

Year:

2017

Language:

english

File:

PDF, 607 KB

english, 2017

9

A proteomics approach for the identification of species-specific immunogenic proteins in the Mycobacterium abscessus complex

Steindor, Mathis, Nkwouano, Vanesa, Stefanski, Anja, Stuehler, Kai, Ioerger, Thomas Richard, Bogumil, David, Jacobsen, Marc, Mackenzie, Colin Rae, Kalscheuer, Rainer

Journal:

Microbes and Infection

Year:

2018

Language:

english

File:

PDF, 593 KB

english, 2018

10

[IEEE 2020 42nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) in conjunction with the 43rd Annual Conference of the Canadian Medical and Biological Engineering Society - Montreal, QC, Canada (2020.7.20-2020.7.24)] 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) - Reinforcement Learning using EEG signals for Therapeutic Use of Music in Emotion Management

Dutta, Esha, Bothra, Ananya, Chaspari, Theodora, Ioerger, Thomas, Mortazavi, Bobak J.

Year:

2020

File:

PDF, 470 KB

2020

11

Learning user interest dynamics with a three-descriptor representation

Dwi H. Widyantoro, Thomas R. Ioerger, John Yen

Journal:

Journal of the American Society for Information Science and Technology

Year:

2001

Language:

english

File:

PDF, 183 KB

english, 2001

12

Sequence diversity of pistil S-proteins associated with gametophytic self-incompatibility inNicotiana alata

Ahmed Kheyr-Pour, Scott B. Bintrim, Thomas R. Ioerger, Rene Remy, Scott A. Hammond, Tehhui Kao

Journal:

Plant Reproduction

Year:

1990

Language:

english

File:

PDF, 1.26 MB

english, 1990

13

Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection

Ford, Christopher B, Lin, Philana Ling, Chase, Michael R, Shah, Rupal R, Iartchouk, Oleg, Galagan, James, Mohaideen, Nilofar, Ioerger, Thomas R, Sacchettini, James C, Lipsitch, Marc

Journal:

Nature Genetics

Year:

2011

Language:

english

File:

PDF, 784 KB

english, 2011

14

FLAME—Fuzzy Logic Adaptive Model of Emotions

Magy Seif El-Nasr, John Yen, Thomas R. Ioerger

Journal:

Autonomous Agents and Multi-Agent Systems

Year:

2000

Language:

english

File:

PDF, 272 KB

english, 2000

15

Crystal structures of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with substrate and inhibitors

Manchi C.M. Reddy, Gokulan Kuppan, Nishant D. Shetty, Joshua L. Owen, Thomas R. Ioerger, James C. Sacchettini

Journal:

Protein Science

Year:

2008

Language:

english

File:

PDF, 754 KB

english, 2008

16

Crystal structure of Mycobacterium tuberculosis LrpA, a leucine-responsive global regulator associated with starvation response

Manchi C.M. Reddy, Kuppan Gokulan, William R. Jacobs Jr, Thomas R. Ioerger, James C. Sacchettini

Journal:

Protein Science

Year:

2008

Language:

english

File:

PDF, 500 KB

english, 2008

17

The Manipulation of Images to Handle Indeterminacy in Spatial Reasoning

Thomas R. Ioerger

Journal:

Cognitive Science (Blackwell Publishing)

Year:

1994

Language:

english

File:

PDF, 2.98 MB

english, 1994

18

Combining bundle search with buyer coalition formation in electronic markets: A distributed approach through explicit negotiation

Linli He, Thomas R. Ioerger

Journal:

Electronic Commerce Research and Applications

Year:

2005

Language:

english

File:

PDF, 426 KB

english, 2005

19

The non-clonality of drug resistance in Beijing-genotype isolates ofMycobacterium tuberculosisfrom the Western Cape of South Africa

Thomas R Ioerger, Yicheng Feng, Xiaohua Chen, Karen M Dobos, Thomas C Victor, Elizabeth M Streicher, Robin M Warren, Nicolaas C Gey van Pittius, Paul D Van Helden, James C Sacchettini

Journal:

Year:

2010

Language:

english

File:

PDF, 530 KB

english, 2010

20

Analysis of diversity of nucleotide and amino acid distributions in the VD and DJ joining regions in Ig heavy chains

Michael Hofle, D.Scott Linthicum, Thomas Ioerger

Journal:

Molecular Immunology

Year:

2000

Language:

english

File:

PDF, 305 KB

english, 2000

21

Conservation of cys–cys trp structural triads and their geometry in the protein domains of immunoglobulin superfamily members

Thomas R Ioerger, Chunguang Du, D.Scott Linthicum

Journal:

Molecular Immunology

Year:

1999

Language:

english

File:

PDF, 233 KB

english, 1999

22

Pyrrolinone–Pyrrolidine Oligomers as Universal Peptidomimetics

Raghuraman, Arjun, Ko, Eunhwa, Perez, Lisa M., Ioerger, Thomas R., Burgess, Kevin

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 871 KB

english, 2011

23

Self-incompatibility inPetunia inflata: isolation and characterization of cDNAs encoding three S-allele-associated proteins

Yunjun Ai, Anuradha Singh, Craig E. Coleman, Thomas R. Ioerger, Ahmed Kheyr-Pour, Teh-hui Kao

Journal:

Plant Reproduction

Year:

1990

Language:

english

File:

PDF, 1.20 MB

english, 1990

24

Structure-Guided Discovery of Phenyl-diketo Acids as Potent Inhibitors of M. tuberculosis Malate Synthase

Inna V. Krieger, Joel S. Freundlich, Vijay B. Gawandi, Justin P. Roberts, Vidyadhar B. Gawandi, Qingan Sun, Joshua L. Owen, Maria T. Fraile, Sofia I. Huss, Jose-Luis Lavandera, Thomas R. Ioerger, Jame

Journal:

Chemistry & Biology

Year:

2012

Language:

english

File:

PDF, 738 KB

english, 2012

25

Discovery of Novel Nitrobenzothiazole Inhibitors for Mycobacterium tuberculosis ATP Phosphoribosyl Transferase (HisG) through Virtual Screening

Cho, Yoonsang, Ioerger, Thomas R., Sacchettini, James C.

Journal:

Journal of Medicinal Chemistry

Year:

2008

Language:

english

File:

PDF, 2.01 MB

english, 2008

26

Exploring Key Orientations at Protein–Protein Interfaces with Small Molecule Probes

Ko, Eunhwa, Raghuraman, Arjun, Perez, Lisa M., Ioerger, Thomas R., Burgess, Kevin

Journal:

Journal of the American Chemical Society

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

27

Genome Analysis of Multi- and Extensively-Drug-Resistant Tuberculosis from KwaZulu-Natal, South Africa

Ioerger, Thomas R., Koo, Sunwoo, No, Eun-Gyu, Chen, Xiaohua, Larsen, Michelle H., Jacobs, William R., Pillay, Manormoney, Sturm, A. Willem, Sacchettini, James C., Marais, Ben

Journal:

Year:

2009

Language:

english

File:

PDF, 141 KB

english, 2009

28

[ACM Press the eighth international conference - Kansas City, Missouri, United States (1999.11.02-1999.11.06)] Proceedings of the eighth international conference on Information and knowledge management - CIKM '99 - An adaptive algorithm for learning changes in user interests

Widyantoro, Dwi H., Ioerger, Thomas R., Yen, John

Year:

1999

Language:

english

File:

PDF, 910 KB

english, 1999

29

[American Institute of Aeronautics and Astronautics AIAA Guidance, Navigation, and Control Conference and Exhibit - Providence, Rhode Island ()] AIAA Guidance, Navigation, and Control Conference and Exhibit - Automated Conflict Resolution for Air Traffic Management Using Cooperative Multiagent Negotiation

Wollkind, Steve, Valasek, John, Ioerger, Thomas

Year:

2004

Language:

english

File:

PDF, 320 KB

english, 2004

30

Sterilization of granulomas is common in active and latent tuberculosis despite within-host variability in bacterial killing

Lin, Philana Ling, Ford, Christopher B, Coleman, M Teresa, Myers, Amy J, Gawande, Richa, Ioerger, Thomas, Sacchettini, James, Fortune, Sarah M, Flynn, JoAnne L

Journal:

Nature Medicine

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

31

A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing data

DeJesus, Michael A, Ioerger, Thomas R

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 419 KB

english, 2013

32

[ACM Press the 2005 ACM symposium - Santa Fe, New Mexico (2005.03.13-2005.03.17)] Proceedings of the 2005 ACM symposium on Applied computing - SAC '05 - Forming resource-sharing coalitions

He, Linli, Ioerger, Thomas R.

Year:

2005

Language:

english

File:

PDF, 114 KB

english, 2005

33

Reannotation of translational start sites in the genome of Mycobacterium tuberculosis

DeJesus, Michael A., Sacchettini, James C., Ioerger, Thomas R.

Journal:

Year:

2013

Language:

english

File:

PDF, 905 KB

english, 2013

34

Evaluating minimalist mimics by exploring key orientations on secondary structures (EKOS)

Xin, Dongyue, Ko, Eunhwa, Perez, Lisa M., Ioerger, Thomas R., Burgess, Kevin

Journal:

Organic & Biomolecular Chemistry

Year:

2013

Language:

english

File:

PDF, 5.05 MB

english, 2013

35

[IEEE 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering - Boston, MA, USA (2007.10.14-2007.10.17)] 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering - Database Approaches and Data Representation in Structural Bioinformatics

Gopal, Kreshna, Sacchettini, James C., Ioerger, Thomas R.

Year:

2007

Language:

english

File:

PDF, 2.33 MB

english, 2007

36

[IEEE 2007 Seventh IEEE International Conference on Data Mining - Workshops (ICDM Workshops) - Omaha, NE, USA (2007.10.28-2007.10.31)] Seventh IEEE International Conference on Data Mining Workshops (ICDMW 2007) - Distance Metric Learning through Optimization of Ranking

Gopal, Kreshna, Ioerger, Thomas R.

Year:

2007

Language:

english

File:

PDF, 194 KB

english, 2007

37

Capturing Uncertainty by Modeling Local Transposon Insertion Frequencies Improves Discrimination of Essential Genes

DeJesus, Michael A., Ioerger, Thomas R.

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 394 KB

english, 2015

38

A Novel Antimycobacterial Compound Acts as an Intracellular Iron Chelator

Dragset, Marte S., Poce, Giovanna, Alfonso, Salvatore, Padilla-Benavides, Teresita, Ioerger, Thomas R., Kaneko, Takushi, Sacchettini, James C., Biava, Mariangela, Parish, Tanya, Argüello, José M., Ste

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2015

Language:

english

File:

PDF, 2.51 MB

english, 2015

39

MODELING AND ANALYZING MULTI-AGENT BEHAVIORS USING PREDICATE/TRANSITION NETS

XU, DIANXIANG, VOLZ, RICHARD A., IOERGER, THOMAS R., YEN, JOHN

Journal:

International Journal of Software Engineering and Knowledge Engineering

Year:

2003

Language:

english

File:

PDF, 256 KB

english, 2003

40

DETERMINING RELEVANT FEATURES TO RECOGNIZE ELECTRON DENSITY PATTERNS IN X-RAY PROTEIN CRYSTALLOGRAPHY

GOPAL, KRESHNA, ROMO, TOD D., SACCHETTINI, JAMES C., IOERGER, THOMAS R.

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2005

Language:

english

File:

PDF, 691 KB

english, 2005

41

Identification of New Drug Targets and Resistance Mechanisms in Mycobacterium tuberculosis

Ioerger, Thomas R., O’Malley, Theresa, Liao, Reiling, Guinn, Kristine M., Hickey, Mark J., Mohaideen, Nilofar, Murphy, Kenan C., Boshoff, Helena I. M., Mizrahi, Valerie, Rubin, Eric J., Sassetti, Chri

Journal:

Year:

2013

Language:

english

File:

PDF, 852 KB

english, 2013

42

High-Throughput Differentiation and Screening of a Library of Mutant Stem Cell Clones Defines New Host-Based Genes Involved in Rabies Virus Infection

Wallis, Deeann, Loesch, Kimberly, Galaviz, Stacy, Sun, Qingan, DeJesus, Michael, Ioerger, Thomas, Sacchettini, James C.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

43

Automatic generation of communication and teamwork within multi-agent teams

Biggers, Keith E., Ioerger, Thomas R.

Journal:

Applied Artificial Intelligence

Year:

2001

Language:

english

File:

PDF, 765 KB

english, 2001

44

High-Resolution Phenotypic Profiling Defines Genes Essential for Mycobacterial Growth and Cholesterol Catabolism

Griffin, Jennifer E., Gawronski, Jeffrey D., DeJesus, Michael A., Ioerger, Thomas R., Akerley, Brian J., Sassetti, Christopher M., Ramakrishnan, Lalita

Journal:

Year:

2011

Language:

english

File:

PDF, 531 KB

english, 2011

45

Global Assessment of Genomic Regions Required for Growth in Mycobacterium tuberculosis

Zhang, Yanjia J., Ioerger, Thomas R., Huttenhower, Curtis, Long, Jarukit E., Sassetti, Christopher M., Sacchettini, James C., Rubin, Eric J., Behr, Marcel A.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.46 MB

english, 2012

46

[ACM Press the fourth international joint conference - The Netherlands (2005.07.25-2005.07.29)] Proceedings of the fourth international joint conference on Autonomous agents and multiagent systems - AAMAS '05 - Observation-based proactive communication in team cooperation

Zhang, Yu, Volz, Richard A., Ioerger, Thomas R.

Year:

2005

Language:

english

File:

PDF, 236 KB

english, 2005

47

[ACM Press the International Conference - Wshington DC, USA (2013.09.22-2013.09.25)] Proceedings of the International Conference on Bioinformatics, Computational Biology and Biomedical Informatics - BCB'13 - Improving discrimination of essential genes by modeling local insertion frequencies in transposon mutagenesis data

DeJesus, Michael A., Ioerger, Thomas R.

Year:

2007

Language:

english

File:

PDF, 326 KB

english, 2007

48

[ACM Press the third annual conference - Seattle, Washington, United States (1999..-..)] Proceedings of the third annual conference on Autonomous Agents - AGENTS '99 - PETEEI

El-Nasr, Magy Seif, Ioerger, Thomas R., Yen, John

Year:

1999

Language:

english

File:

PDF, 974 KB

english, 1999

49

[ACM Press the fourth international conference - Barcelona, Spain (2000.06.03-2000.06.07)] Proceedings of the fourth international conference on Autonomous agents - AGENTS '00 - A knowledge-based approach for designing intelligent team training systems

Yin, Jianwen, Miller, Michael S., Ioerger, Thomas R., Yen, John, Volz, Richard A.

Year:

2000

Language:

english

File:

PDF, 843 KB

english, 2000

50

[ACM Press the fifth international conference - Montreal, Quebec, Canada (2001..-..)] Proceedings of the fifth international conference on Autonomous agents - AGENTS '01 - A formal model of responsibilities in agent-based teams

Johnson, J. Colby, Ioerger, Thomas R.

Year:

2001

Language:

english

File:

PDF, 109 KB

english, 2001